61
edits
Changes
From Genome Analysis Wiki
Jump to navigationJump to search→Next, prepare to use the Flux/Torque/PBS cluster
echo "job ended with status $? at $(date)"
echo "job ended with status $? at $(date)"
===Finally, submit your jobs===
13. Run <code>qsub script_thats_in_charge.sh</code>. It's important that you run this in the same folder where <code>pbs.options</code> lives.
13. Run <code>qsub script_thats_in_charge.sh</code>. It's important that you run this in the same folder where <code>pbs.options</code> lives.
14. Once that finishes, if any steps remain, then update YOUR_MAKEFILE_TARGETS_FROM_STEP_10 and go back to step 13.
14. Once that finishes, if any steps remain, then update YOUR_MAKEFILE_TARGETS_FROM_STEP_10 and go back to step 13.
