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Variant classification (view source)

Revision as of 11:24, 5 September 2014

462 bytes removed ,  11:24, 5 September 2014
→‎Output
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= Output  =
 
= Output  =
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Summarizes the variants in a VCF file
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This is the annotated output of peek in the vt suite.
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<div class=" mw-collapsible mw-collapsed">
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  #summarizes the variants found in mills.vcf
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  vt peek mills.vcf
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<div class="mw-collapsible-content">
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  usage : vt peek [options] <in.vcf>
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  options : -o  output VCF file [-]
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            -I  file containing list of intervals []
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            -i  intervals []
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            -r  reference sequence fasta file []
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            --  ignores the rest of the labeled arguments following this flag
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            -h  displays help
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</div>
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</div>
      
  #This is a sample output of a peek command which summarizes the variants found in a VCF file.
 
  #This is a sample output of a peek command which summarizes the variants found in a VCF file.
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