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: a.The reference and alternate sequences are of the same length and have to be greater than 1 and all nucleotides in the sequences differ from one another.
 
: a.The reference and alternate sequences are of the same length and have to be greater than 1 and all nucleotides in the sequences differ from one another.
 
: OR
 
: OR
: b. all reference and alternate sequences have the same length.
+
: b. all reference and alternate sequences have the same length (this is applicable to all alleles).
 
;3. INDEL
 
;3. INDEL
: a. The reference and alternate sequence are not the same length.
+
: a. The reference and alternate sequences are not of the same length.
 
;4. CLUMPED
 
;4. CLUMPED
 
:  a. A clumping of nearby SNPs, MNPs or Indels.
 
:  a. A clumping of nearby SNPs, MNPs or Indels.
 
;5. SV
 
;5. SV
: The alternate sequence is represented by a angled bracket tag.
+
: The alternate sequence is represented by an angled bracket tag.
    
= Classification Procedure =
 
= Classification Procedure =
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