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# CHIP_RA : Estimated reference bias parameter Pr(refBase|HOMALT) (when --chip-refBias or --chip-full is used)
# CHIP_RA : Estimated reference bias parameter Pr(refBase|HOMALT) (when --chip-refBias or --chip-full is used)
# DPREF : Depth (Coverage) of HomRef site (based on the genotypes of (SELF_SM/BEST_SM), passing mapQ, baseQual, maxDepth thresholds.
# DPREF : Depth (Coverage) of HomRef site (based on the genotypes of (SELF_SM/BEST_SM), passing mapQ, baseQual, maxDepth thresholds.
# RDPHET : DPHET/DPREF, Relative depth at Heterozygous site.
# RDPHET : DPHET/DPREF, Relative depth to HomRef site at Heterozygous site.
# RDPALT : DPHET/DPREF, Relative depth at HomAlt site.
# RDPALT : DPHET/DPREF, Relative depth to HomRef site at HomAlt site.
=== A guideline to interpret output files ===
=== A guideline to interpret output files ===
