Changes

   #this is a sample output for indel profiling.

   #this is a sample output for indel profiling.

   # square brackets contain the ins/del ratio. 

   # square brackets contain the ts/tv ratio.   

  # for the FS/NFS field, that is the proportion of coding indels that are frame shifted.   

   # The numbers in curved bracket are the counts of ts and tv SNPs respectively.

   # The numbers in curved bracket are the counts of frame shift and non frame shift indels respectively.

  # Low complexity shows what percent of the SNPs are in low complexity regions.

   data set

   data set

     No. SNPs          :    508603 [2.09]

     No. SNPs          :    508603 [2.09]

         Low complexity :      0.08 (39837/508603) <br>

         Low complexity :      0.08 (39837/508603) <br>

   1000g

   1000g