1,102
edits
Changes
From Genome Analysis Wiki
Jump to navigationJump to search→Concatenate
#concatenate chr1.mills.bcf and chr2.mills.bcf
#concatenate chr1.mills.bcf and chr2.mills.bcf
vt cat chr1.mills.bcf chr2.mills.bcf -o mills.bcf
vt cat chr1.mills.bcf chr2.mills.bcf -o mills.bcf
#concatenate chr1.mills.bcf and chr2.mills.bcf with the naive option
#naive option assumes the headers are all the same and avoids translation of
#encodings between BCF files that have different headers. This is a much faster
#option if you know the nature of your BCF files in advance.
vt cat -n chr1.mills.bcf chr2.mills.bcf -o mills.bcf
<div class="mw-collapsible-content">
<div class="mw-collapsible-content">
