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, 22:43, 7 November 2017
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− | = Pedigree File =
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− | vt understands an augmented version introduced by [hmkang@umich.edu Hyun] of the PED described by [http://zzz.bwh.harvard.edu/plink/data.shtml#ped plink].
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− | The pedigree file format is as follows with the following mandatory fields:
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− | {| class="wikitable"
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− | |-
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− | ! scope="col"| Field
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− | ! scope="col"| Description
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− | ! scope="col"| Valid Values
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− | |-
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− | |Family ID<br>
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− | Individual ID<br>
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− | Paternal ID<br>
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− | Maternal ID<br>
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− | Sex<br>
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− | Phenotype
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− | |ID of this family <br>
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− | ID of this individual <br>
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− | ID of the father <br>
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− | ID of the mother <br>
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− | Sex of the individual. <br>
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− | Phenotype.
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− | |[A-Za-z_]+<br>
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− | [A-Za-z_]+ <br>
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− | [A-Za-z_]+ <br>
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− | [A-Za-z_]+<br>
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− | 1 = male, 2 = female and other = alternative<br>
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− | [A-Za-z_]+
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− | |}
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− | Family ID
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− | Individual ID
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− | Paternal ID
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− | Maternal ID
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− | Sex (1=male; 2=female; other=unknown)
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− | Phenotype
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− | ceu NA12878 NA12891 NA12892 female
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− | yri NA19240 NA19239 NA19238 female
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− | ceu NA12878,NA12878A NA12891 NA12892 female
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− | yri NA19240 NA19239 NA19238 female
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− | ceu NA12878,NA12878A NA12891 NA12892 0
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− | yri NA19240 NA19239 NA19238 0
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| = Pedigree File = | | = Pedigree File = |