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This is implemented in [http://genome.sph.umich.edu/wiki/Vt#Normalization vt].
This is implemented in [http://genome.sph.umich.edu/wiki/Vt#Normalization vt].
= Why you should use vt's implementation of normalization =
{| class="wikitable"
|-
! scope="col"| Dataset
! scope="col"| bcftools
! scope="col"| gatk
! scope="col"| vt
! scope="col"| comments
|-
| #normalized
| -
| 18794
| 18849
| -
|-
| #normalized after bcftools
| -
| -
| -
| -
|-
| #normalized after gatk
| -
| -
| 57
| -
|-
| #normalized after vt
| -
| 0
| -
| -
|-
= Maintained by =
= Maintained by =
This page is maintained by [mailto:atks@umich.edu Adrian].
This page is maintained by [mailto:atks@umich.edu Adrian].
