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Revision as of 13:20, 18 June 2014
, 13:20, 18 June 2014→Introduction
The main purpose of this page is to provide step-by-step command lines for estimating ancestry of 6 targeted sequencing samples (2 HapMap trios) in a principal component space generated using genome-wide SNP data from the Human Genome Diversity Project (HGDP).
The main purpose of this page is to provide step-by-step command lines for estimating ancestry of 6 targeted sequencing samples (2 HapMap trios) in a principal component space generated using genome-wide SNP data from the Human Genome Diversity Project (HGDP).
For reference of more details about the options and usage of the software, please read the [http://www.sph.umich.edu/csg/chaolong/LASER/LASER_Manual.pdf manual].
For more details about the options and usage of the software, please read the [http://www.sph.umich.edu/csg/chaolong/LASER/LASER_Manual.pdf manual].
== LASER workflow ==
== LASER workflow ==
