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Run GotCloud SnpCall
Now that we have all of our input files, we need just a simple command to run:
${GC}/gotcloud snpcall --conf ${INSS}/gotcloud.conf --numjobs 4 --region 22:36000000-37000000--base_prefix ${SS} --outdir ${OUT}
* --numjobs tells GotCloud how many jobs to run in parallel
** Depends on your system

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