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A. We believe that BN matrix is more robust to construct the empirical kinship matrix. Also we recommend to use call rate 95% threshold and MAF threshold of 0.01 when preparing the data.
A. We believe that BN matrix is more robust to construct the empirical kinship matrix. Also we recommend to use call rate 95% threshold and MAF threshold of 0.01 when preparing the data.
=== NaN in the kinship file ==
=== NaN in the kinship file ===
Q. I am observing a series of -nan in the kinship matrix. What is the problem?
Q. I am observing a series of -nan in the kinship matrix. What is the problem?
