From Genome Analysis Wiki
Jump to navigationJump to search
546 bytes added
, 17:15, 9 October 2014
Line 47: |
Line 47: |
| ### <code>cd gc_src/src</code> | | ### <code>cd gc_src/src</code> |
| ### <code>make</code> | | ### <code>make</code> |
| + | ### <code>cd ..</code> |
| + | ## Generate the installation. |
| + | ### <code>cd gc_src/</code> |
| + | ### <code>./debian/makedeb.sh bin =</code> |
| + | ### <code>cd</code> |
| + | # Install: <code>sudo dpkg -i gc_src/gotcloud-bin_1.14.3_amd64.deb</code> |
| + | # Move installation to home so will be on all nodes: <code>sudo mv /usr/local/gotcloud .</code> |
| + | # Remove source: <code>rm -rf gc_src/</code> (required since not enough storage space.) |
| # Get the reference files | | # Get the reference files |
| ## wget ftp://anonymous@share.sph.umich.edu/gotcloud/ref/h37-db135-v3.tgz | | ## wget ftp://anonymous@share.sph.umich.edu/gotcloud/ref/h37-db135-v3.tgz |
| + | # Untar: <code>tar xvf h37-db135-v3.tgz</code> |
| + | |
| + | |
| + | |
| + | === Install GotCloud in ubuntu home directory === |
| + | |
| + | Set aliases in .bashrc |
| + | |
| + | == Create Image == |
| | | |
| == Set Up Swap Space == | | == Set Up Swap Space == |