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Revision as of 21:59, 23 November 2014
, 21:59, 23 November 2014→GotCloud BAM List File
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<li>It doesn't have a full path to the BAM file, while your list has /home/...</li>
<li>It doesn't have a full path to the BAM file, while your list has /home/...</li>
[[File:Bamindex1.png|300px]]
[[File:BamList1.png|300px]]
<li>That's ok, we will use the <code>--base_prefix ${SS}</code> command-line option to prefix the BAM paths</li>
<li>That's ok, we will use the <code>--base_prefix ${SS}</code> command-line option to prefix the BAM paths</li>
<li>Alternatively, we could have set BAM_PREFIX in <code>gotcloud.conf</code> to the path to the BAMs
<li>Alternatively, we could have set BAM_PREFIX in <code>gotcloud.conf</code> to the path to the BAMs
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<ul>
<li>If not, let me know</li>
<li>If not, let me know</li>
[[File:Bamindex2.png|400px]]
[[File:BamList2.png|400px]]
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