Changes

From Genome Analysis Wiki
Jump to navigationJump to search
Line 202: Line 202:  
Curious if it started running properly?  Check out this screenshot:
 
Curious if it started running properly?  Check out this screenshot:
 
<div class="mw-collapsible-content">
 
<div class="mw-collapsible-content">
[[File:SnpcallStart.png|750px]]
+
[[File:SnpcallStartNew.png|550px]]
 
</div>
 
</div>
 
</div>
 
</div>
This should take about 5 minutes to run.
+
This should take about 5-7 minutes to run.
 
* After about 4 minutes of running, GotCloud snpcall will output some text to the screen.  Don't worry, that is expected and is just output from some of the intermediate tools.
 
* After about 4 minutes of running, GotCloud snpcall will output some text to the screen.  Don't worry, that is expected and is just output from some of the intermediate tools.
* It should end with a line like: <code>Commands finished in 289 secs with no errors reported</code>
+
* It should end with a line like: <code>Commands finished in 329 secs with no errors reported</code>
    
If you cancelled GotCloud part way through, just rerun your GotCloud command and it will pick up where it left off.
 
If you cancelled GotCloud part way through, just rerun your GotCloud command and it will pick up where it left off.

Navigation menu