111
edits
Changes
From Genome Analysis Wiki
Jump to navigationJump to searchSeqShop: Ancestry On Your Own Genome, December 2014 (view source)
Revision as of 01:34, 9 December 2014
, 01:34, 9 December 2014→Estimate ancestry
This step will take a few seconds.
This step will take a few seconds.
$LASER/laser -g $HGDP/HGDP.633K.euro.geno -c $HGDP/HGDP.633K.euro.RefPC.coord -s $OUT/ancestry/$SAMPLE.Euro.laser.seq -K 20 -k 4 -M 0.8 -o $OUT/ancestry/$SAMPLE.Euro.laser.1 &
$LASER/laser -g $HGDP/HGDP.633K.euro.geno -c $HGDP/HGDP.633K.euro.RefPC.coord -s $OUT/ancestry/$SAMPLE.HGDP.seq -K 20 -k 4 -M 0.8 -o $OUT/ancestry/$SAMPLE.HGDP-Euro &
View the results:
View the results:
less -S $OUT/ancestry/${SAMPLE}.Euro.laser.1.SeqPC.coord
less -S $OUT/ancestry/${SAMPLE}.HGDP-Euro.SeqPC.coord
== Visualizing Ancestry ==
== Visualizing Ancestry ==
