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Revision as of 21:33, 17 March 2015
, 21:33, 17 March 2015→Outputs
*** ''*/SAMPLE.genoCheck.depthRG'' - depth distribution of the sequence reads per read group
*** ''*/SAMPLE.genoCheck.depthRG'' - depth distribution of the sequence reads per read group
*** ''*/SAMPLE.genoCheck.depthSM'' - depth distribution of the sequence reads per sample
*** ''*/SAMPLE.genoCheck.depthSM'' - depth distribution of the sequence reads per sample
*** ''*/SAMPLE.genoCheck.err'' - ?
*** ''*/SAMPLE.genoCheck.err'' - log file
*** ''*/SAMPLE.genoCheck.log'' - ?
*** ''*/SAMPLE.genoCheck.log'' - log file
*** ''*/SAMPLE.genoCheck.OK'' - temp file indicating the VerifyBAMID step completed successfully
*** ''*/SAMPLE.genoCheck.OK'' - temp file indicating the VerifyBAMID step completed successfully
*** ''*/SAMPLE.genoCheck.selfRG'' - per-readGroup statistics describing how well each lane matches to the annotated sample
*** ''*/SAMPLE.genoCheck.selfRG'' - per-readGroup statistics describing how well each lane matches to the annotated sample
