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From Genome Analysis Wiki
→A Simple Tutorial for Using the conditional.rareMETALS.single
res<-conditional.rareMETALS.single(candidate.variant.vec=c("19:11200282","19:11200309"), score.stat.file, cov.file,
known.variant.vec=c("19:11200754","19:11200806","19:11200839"), maf.cutoff=0.05, no.boot =1000,
alternative = c("two.sided", "greater", "less"), ix.gold = 1,
out.digits = 4, callrate.cutoff = 0, hwe.cutoff = 0,
p.value.known.variant.vec = NA, anno.known.variant.vec = NA,
