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RareMETALS

501 bytes added, 15:49, 13 April 2015
A Simple Tutorial for Using the rareMETALS.single.group function
== A Simple Tutorial for Using the rareMETALS.single.group function ==
[[media:Example.jpg]]
res.site<-read.table("groupFile.txt",header=T) refaltList <- list(pos=paste(res.site[,1],res.site[,2],sep=":"),ref=res.site$AF,alt=res.site$ALT,af=res.site$AF,af.diff.max=0.5,checkAF=T) res31<-rareMETALS.single.group(score.stat.file,cov.file=NULL, range="19:11200093-11201275", refaltList, alternative = c("two.sided"), callrate.cutoff = 0, hwe.cutoff = 0, correctFlip = TRUE, analyzeRefAltListOnly = TRUE) print(res31$res.out)
== A Simple Tutorial for Using the rareMETALS.range function ==
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