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This tutorial builds on the alignment tutorial, if you have not already, please first run that tutorial: [[SeqShop:_Sequence_Mapping_and_Assembly_Practical, December 2014|Alignment Tutorial]]

This tutorial builds on the alignment tutorial, if you have not already, please first run that tutorial: [[SeqShop:_Sequence_Mapping_and_Assembly_Practical, May 2015|Alignment Tutorial]]

It also uses the bam.list file created in the SnpCall Tutorial.  If you have not yet run that tutorial, please follow the directions at: [[SeqShop:_Variant_Calling_and_Filtering_for_SNPs_Practical, December 2014#GotCloud_BAM_List_File|GotCloud BAM List File]]

It also uses the bam.list file created in the SnpCall Tutorial.  If you have not yet run that tutorial, please follow the directions at: [[SeqShop:_Variant_Calling_and_Filtering_for_SNPs_Practical, May 2015#GotCloud_BAM_List_File|GotCloud BAM List File]]