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SeqShop: Aligning Your Own Genome, May 2015 (view source)

Revision as of 17:57, 15 May 2015

204 bytes removed ,  17:57, 15 May 2015
→‎Goals of This Session
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* You will get to take home both the original FASTQs and the aligned BAMs on a USB drive
 
* You will get to take home both the original FASTQs and the aligned BAMs on a USB drive
 
** You will get it by the end of the week if not before - it takes a while to copy 74G-111G
 
** You will get it by the end of the week if not before - it takes a while to copy 74G-111G
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** 4 samples will get "modified" BAMs so both FASTQ & BAM would fit on the drive
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*** "binned" qualities, duplicates & unmapped reads removed
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**** In future all generated BAMs will be automatically binned
   
** Those that didn't get sequenced will get a drive with NA12878 public sample on it
 
** Those that didn't get sequenced will get a drive with NA12878 public sample on it
  
Saichen
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