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117 bytes added
, 22:06, 21 June 2015
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| Failed rare variants : ~PASS&&(INFO.AC/INFO.AN<0.005) | | Failed rare variants : ~PASS&&(INFO.AC/INFO.AN<0.005) |
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− | Regular expression matching PERL style (implemented with pcre2) | + | [http://www.pcre.org/current/doc/html/pcre2pattern.html#SEC1 Regular expression] matching PERL style (implemented with pcre2) |
| Sometimes, an info field will contain several values in a string with functional annotation, to match what you want, | | Sometimes, an info field will contain several values in a string with functional annotation, to match what you want, |
| just use INFO.ANNO=~'<perl regular expression>' | | just use INFO.ANNO=~'<perl regular expression>' |
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| Passed variants in intergenic regions or UTR : PASS&&INFO.ANNO=~'Intergenic|UTR' | | Passed variants in intergenic regions or UTR : PASS&&INFO.ANNO=~'Intergenic|UTR' |
| Passed variants in intergenic regions or UTR ignoring case : PASS&&INFO.ANNO=~'(?i)Intergenic|UTR' | | Passed variants in intergenic regions or UTR ignoring case : PASS&&INFO.ANNO=~'(?i)Intergenic|UTR' |
| + | (?..) is an internal option setting syntax for pcre2 |
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