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[http://www.sph.umich.edu/csg/yli/mach/ '''MaCH'''] (MArkov Chain Haplotyping), mostly known as a software for genotype imputation, is a Hidden Markov Model (HMM) based haplotyper that reconstructs haplotypes from genotypes of unrelated individuals. Three primary utilities of MaCH are (1) to resolve haplotypes from diploid genotypes; (2) impute missing genotypes; and (3) perform disease mapping analysis.
[[Category:Software]]
[http://www.sph.umich.edu/csg/yli/mach/ '''MaCH'''] (MArkov Chain Haplotyping), mostly known as a software for genotype imputation, is a Hidden Markov Model (HMM) based haplotyper can that reconstruct haplotypes from genotypes of unrelated individuals. Three primary uses of MaCH are (1) to resolve haplotypes from diploid genotypes; (2) impute missing genotypes; and (3) perform disease mapping analysis.
== Input Files ==
== Input Files ==
