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89 bytes removed
, 15:09, 29 June 2015
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− | res2<-conditional.rareMETALS2.single(candidate.variant.vec=c("19:42906914","19:45854819"), score.stat.file, cov.file,known.variant.vec=c("19:43995275","19:44047839","19:44084155"), maf.cutoff=0.05, no.boot =1000,
| + | res2<-conditional.rareMETALS2.single(candidate.variant.vec=c("19:42906914","19:45854819"), score.stat.file, cov.file,known.variant.vec=c("19:43995275","19:44047839","19:44084155"), maf.cutoff=0.05, no.boot =1000, |
− | alternative = c("two.sided"), ix.gold = 1, | + | alternative = c("two.sided"), ix.gold = 1,out.digits = 4, callrate.cutoff = 0, hwe.cutoff = 0,p.value.known.variant.vec = NA, anno.known.variant.vec = NA,anno.candidate.variant.vec = NA) |
− | out.digits = 4, callrate.cutoff = 0, hwe.cutoff = 0,
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− | p.value.known.variant.vec = NA, anno.known.variant.vec = NA,
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− | anno.candidate.variant.vec = NA)
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| print(res2$res.out) | | print(res2$res.out) |
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