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Vt

150 bytes removed, 19:45, 5 October 2015
Annotate Indels
vt annotate_indels in.vcf -r hs37d5.fa -o annotated.sites.vcf
{{scroll box|* Example 01* Example 02* Example 03* Example 04* Example 05* Example 06* Example 07* Example 08* Example 09* Example 10* Example 11* Example 12* Example 13* Example 14 }}{{scroll box|text<div style="height:20em; overflow:auto; border: 2px solid #FFF">
20 82079 . G A 1255.98 . NSAMPLES=1;E=43;N=51;ESUM=43;NSUM=51;FLANKSEQ=GGAGCACGCC[G/A]CCATGCCCGG
20 101362 . G A 1087.13 . NSAMPLES=1;E=36;N=67;ESUM=36;NSUM=67;FLANKSEQ=TAATACTGAA[G/A]TTTACTTCTC
}}</div>
The following shows the trace of how the algorithm works
1,102
edits

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