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=== Discover2 ===
=== Discover ===
Discovers variants from reads in a BAM/CRAM file.
Discovers variants from reads in a BAM/CRAM file.
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#discover variants from NA12878.bam and write to stdout
#discover variants from NA12878.bam and write to stdout
vt discover2 -b NA12878.bam -s NA12878 -r hs37d5.fa -i 20 -v snps,indels,mnps
vt discover -b NA12878.bam -s NA12878 -r hs37d5.fa -i 20
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usage : vt discover2 [options]
usage : vt discover2 [options]
