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Vt (view source)

Revision as of 14:38, 14 February 2016

189 bytes removed ,  14:38, 14 February 2016
→‎Profile VNTRs
Line 1,052: Line 1,052:  
  vt profile_vntrs vntrs.sites.bcf -g vntr.reference.txt  
 
  vt profile_vntrs vntrs.sites.bcf -g vntr.reference.txt  
 
    
 
    
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   profile_vntrs v0.5 z,br.
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   profile_vntrs v0.5
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  Options:    input VCF file                ../20150812_spectrum/vntrs.sites.bcf
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        [g] reference data sets list file  /net/fantasia/home/atks/ref/vt/grch37/vntr.reference.txt
  −
 
   
     no VNTRs          5660874
 
     no VNTRs          5660874
 
     no low complexity  2686460 (47.46%)
 
     no low complexity  2686460 (47.46%)
Atks
1,102

edits

Retrieved from "http://genome.sph.umich.edu/wiki/Special:MobileDiff/14092"

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