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Revision as of 18:57, 25 February 2016
, 18:57, 25 February 2016→Shifting
=== Shifting ===
=== Shifting ===
Consider the motifs ACTT, TACT and TTAC, the following stretches can be observed in the genome
GGGGGGACTTACTTACTTACTTACTTAGGGGG
GGGGGGTACTTACTTACTTACTTACTTGGGGG
GGGGGGTTACTTACTTACTTACTTACTGGGGG
but looking from the right flank, they can easily be CTTA, ACTT and TACT respectively.
The concept of shifting the sequence is useful for grouping such like motifs together.
We define shift as follow
A shift of a sequence is the sliding of the sequence with the alleles wrapped to the front?
=== Reverse Complement ===
=== Reverse Complement ===
