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BamUtil: clipOverlap

29 bytes removed, 23:59, 5 March 2016
Skip Records with any of the Specified Flags (--excludeFlags)
=== Skip Records with any of the Specified Flags (<code>--excludeFlags</code>)===
Skip records with any of the specified flags set, default 0x70C0xF0C
By default skips reads with any of the following flags set:
* fails QC checks
* duplicate
 This parameter was added in version 1.0.10.* supplementary
=== Mark entirely clipped reads as unmapped (<code>--unmapped</code>)===

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