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165 bytes removed
, 12:56, 8 July 2016
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| * When no conditional variant is available, warning is generated but not written to log file. | | * When no conditional variant is available, warning is generated but not written to log file. |
| * SKAT conditional analysis misses the last 3 column names. They should be cond_statistics, cond_pvalue_davis, cond_p_value_liu. | | * SKAT conditional analysis misses the last 3 column names. They should be cond_statistics, cond_pvalue_davis, cond_p_value_liu. |
− | * A seg fault: sometimes you only have very few variants but raremetal still tries to calculate GC.
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− | ** This has been fixed on CSG cluster but not in 4.13.8 release.
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| * enable reading from .gz annotated vcf | | * enable reading from .gz annotated vcf |
| * add SKAT-O | | * add SKAT-O |
| * solve the numeric issue of lambda = 0 in SKAT | | * solve the numeric issue of lambda = 0 in SKAT |