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RAREMETAL Command Reference

234 bytes added, 16:08, 27 November 2016
Association Methods for Meta-analysis
=== Association Methods for Meta-analysis ===
--useExact optimized method for unbalanced studies with unrelated samples, described [ON|OFF[RAREMETAL METHOD#SINGLE_VARIANT_SCORE_TEST]]. --burden [ON|OFF] burden test with equal weight --MAB burden test with MAF as weight --MB [ON|OFF] burden test with sqrt(maf(1-maf)) as weight --VT [ON|OFF] variant threshold test --SKAT [ON|OFF] standard SKAT test
--condition [your.list.of variants.to.be.conditioned.upon]
Additional details for these options are [[Rare-Metal#Association_Methods|available]].
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