Changes

From Genome Analysis Wiki
Jump to: navigation, search

LibStatGen: FASTQ

10 bytes removed, 10:49, 2 February 2017
Classes in the FASTQ Portion of Library
| Class used for reading/validating a fastq file.
|-
| <code>[http://wwwcsg.sph.umich.edu/csg/mktrost/doxygen/current/classBaseCount.html BaseCount]</code>
| Wrapper around an array that has one index per base and an extra index for a total count of all bases. This class is used to keep a count of the number of times each index has occurred. It can print a percentage of the occurrence of each base against the total number of bases.
|-
| <code>[http://wwwcsg.sph.umich.edu/csg/mktrost/doxygen/current/classBaseComposition.html BaseComposition]</code>
| Class that tracks the composition of base by read location.
|-
| <code>[http://wwwcsg.sph.umich.edu/csg/mktrost/doxygen/current/classFastQStatus.html FastQStatus]</code>
| Status for FastQ operations.
|}
 
== FASTQ Output ==
96
edits

Navigation menu