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MaCH: Input Files

3 bytes removed, 10:31, 2 February 2017
Optional Phased Haplotypes
You can retrieve a current set of phased HapMap format haplotypes from http://hapmap.org/downloads/phasing/2007-08_rel22/phased/.
HapMap III phased haplotypes are in different format, you will need to use our converted haplotypes available at http://wwwcsg.sph.umich.edu/csg/yli/mach/download/HapMap3.r2.b36.html
Additional reference files (e.g., those based on data from the 1000 Genomes Project; combined reference files) can be found through links at http://csg.sph.umich.edu//yli/mach/download/
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