Changes

Vt (view source)

38 bytes removed , 22:48, 6 April 2017

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This allows you to extract biallelic indels that are passed on chromosome 20.

−

vt view vt.bcf ~~-g na12878.reference.txt -r genome.fa~~ -f "N_ALLELE==2&&VTYPE==INDEL&&PASS" -i 20

+

vt view vt.bcf -f "N_ALLELE==2&&VTYPE==INDEL&&PASS" -i 20

Other examples of filters

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