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VerifyBamID

30 bytes added, 04:20, 14 June 2017
Column information in the output files
# CHIP_RA : Estimated reference bias parameter Pr(refBase|HOMALT) (when --chip-refBias or --chip-full is used)
# DPREF : Depth (Coverage) of HomRef site (based on the genotypes of (SELF_SM/BEST_SM), passing mapQ, baseQual, maxDepth thresholds.
# RDPHET : DPHET/DPREF, Relative depth to HomRef site at Heterozygous site.# RDPALT : DPHET/DPREF, Relative depth to HomRef site at HomAlt site.
=== A guideline to interpret output files ===

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