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cd DosageConvertor/
cd DosageConvertor/
make
make
== Convert to PLINK Files ==
The following command line should convert a input VCF dosage file to a PLINK dosage file that can be tested for association in PLINK1.07, PLINK1.9, PLINK2.0.
./DosageConvertor --vcfDose TestDataImputedVCF.dose.vcf.gz
--info TestDataImputedVCF.info
--prefix OutPrefix
--type plink
--format 1
This command line would create three files : <code> OutPrefix.plink.dosage.gz, OutPrefix.fam, OutPrefix.map </code>
The command options for DosageConvertor are explained below.
The command options for DosageConvertor are explained below.
