From Genome Analysis Wiki
Jump to: navigation, search

BamUtil: recab

31 bytes added, 23:00, 19 April 2019
Handling Recalibration/Implementation Notes
==Handling Recalibration/Implementation Notes==
Recalibration is a 2-step process that loops through the file twice(stdin is not support as input):
# Build Recalibration Table
# Apply Recalibration Table
NOTE: GATK ignores/skips adapters, but our logic does not.
== How to use it ==

Navigation menu