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42 bytes removed
, 04:35, 4 June 2010
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| === '''How long does imputation take?''' === | | === '''How long does imputation take?''' === |
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− | A: The following factors/parameters affect computational time:
| + | The following factors/parameters affect computational time: |
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| #m, # of genotyped markers (number of markers in .dat file)<br> | | #m, # of genotyped markers (number of markers in .dat file)<br> |
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| #r, # of rounds (-r or --rounds, --mle corresponds to 1-2 rounds) | | #r, # of rounds (-r or --rounds, --mle corresponds to 1-2 rounds) |
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− | <br>
| + | Computational time increases linearly with m, n, r and quadratically with h. On our Xeon 3.0GHz machine, imputation with m=25K, n=250, h=120, and r=100 takes ~20 hours. |
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− | Computational time increases linearly with m, n, r and quadratically with h. On our Xeon 3.0GHz machine, imputation with m=25K, n=250, h=120, and r=100 takes ~20 hours. <br>
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| === '''More questions?''' === | | === '''More questions?''' === |