Changes

=== Association results file ("metal" file)  ===

=== Association results file ("metal" file)  ===

The main input to LocusZoom is a file containing results from an association scan or meta-analysis. The file must have 2 things: markers (SNPs), and p-values. The file should look something like this:  

The main input to LocusZoom is a file containing results from an association scan or meta-analysis. The file must have 2 columns: markers (SNPs), and p-values. The file should look something like this:  

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If your marker and p-value column names are not "MarkerName" and "P-value", you may set them with <code>--markercol</code> and <code>--pvalcol</code> options.  

If your marker and p-value column names are not "MarkerName" and "P-value", you may set them with <code>--markercol</code> and <code>--pvalcol</code> options.  

P-values of any magnitude are supported in scientific notation (we use an arbitrary precision library built-in to python, and transform p-values to the log scale.) If you've already transformed your p-values to the log scale, simply use <code>--no-transform</code> and LocusZoom will not transform them.  

P-values of any magnitude are supported in scientific notation (we use an arbitrary precision library built-in to python, and transform p-values to the log scale.) If you've already transformed your p-values to the log scale, simply use <code>--no-transform</code> and LocusZoom will not transform them.

=== Region  ===

=== Region  ===