Changes

*A gene and chromosome/start/stop specification

*A gene and chromosome/start/stop specification

<pre> --refgene &lt;your gene&gt; --chr # --start &lt;base position&gt; --end &lt;base position&gt; </pre>  

<pre> --refgene &lt;your gene&gt; --chr # --start &lt;base position&gt; --end &lt;base position&gt; </pre>  

This method is similar to the above, except that an exact region is specified. The SNP with the most significant p-value in this region will be used.  

This method is similar to the above, except that an exact region is specified. LD with the SNP with the most significant p-value in this region will be used to color data points.  

*A chromosome/start/stop specification

*A chromosome/start/stop specification

<pre> --chr # --start &lt;base position&gt; --end &lt;base position&gt; </pre>  

<pre> --chr # --start &lt;base position&gt; --end &lt;base position&gt; </pre>  

Once again, the SNP with the most significant p-value will be used in this region.

The SNP with the most significant p-value in this region will be used for estimating LD.

=== Batch mode  ===

=== Batch mode  ===