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Jump to navigationJump to searchCreated page with '== greedy == use only the reference haplotypes (fed to -h or --haps) as reference == states S == use a random subset of S haplotypes as reference == sampleInterval SI == out…'
== greedy ==
use only the reference haplotypes (fed to -h or --haps) as reference
== states S ==
use a random subset of S haplotypes as reference
== sampleInterval SI ==
output every SI rounds based on random sampling from the last Markov iteration
== interimInterval II ==
output every II rounds by building consensus from all previous Markov iterations
use only the reference haplotypes (fed to -h or --haps) as reference
== states S ==
use a random subset of S haplotypes as reference
== sampleInterval SI ==
output every SI rounds based on random sampling from the last Markov iteration
== interimInterval II ==
output every II rounds by building consensus from all previous Markov iterations
