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, 17:27, 4 October 2010
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| --states ST | | --states ST |
− | use a random subset of ST haplotypes as reference. We recommend values between 200 - 500. More states result in more accurate haplotypes, but are computational more expensive. | + | use a random subset of ST haplotypes as reference. We recommend values between 200 - 500. More states result in more accurate haplotypes, but are computational more expensive and require more memory. |
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| --interim I | | --interim I |
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| --compact | | --compact |
| reduces the amount of memory needed dramatically, but doubles execution time. | | reduces the amount of memory needed dramatically, but doubles execution time. |
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| === Step 2: Imputation === | | === Step 2: Imputation === |