Changes

From Genome Analysis Wiki
Jump to navigationJump to search
26 bytes removed ,  01:40, 2 November 2010
no edit summary
Line 2: Line 2:  
== Status  ==
 
== Status  ==
   −
The initial version of a [http://en.wikipedia.org/wiki/FASTQ_format FastQ] Validator is complete. It was built using the [[FastQFile]] class which can also be used as a library.
+
The initial version of a FASTQ Validator is complete. It was built using the [[FastQFile]] class which is part of the [[C++ Library: libStatGen|StatGen Library]].
   −
This command line tool can be found at: http://www.sph.umich.edu/csg/mktrost/fastQFile/
+
This command line tool can be downloaded as part of the library: http://genome.sph.umich.edu/wiki/Software#Download
    
Note: Since the FastQValidator checks for unique sequence names, it may use a large amount of memory.
 
Note: Since the FastQValidator checks for unique sequence names, it may use a large amount of memory.
Line 86: Line 86:     
== Libraries & Classes ==
 
== Libraries & Classes ==
*[[C++ Library: libfqf|libfqf.a]]
+
*[[C++ Library: libStatGen]]
 +
**ParameterList - Class for reading in Parameters.
 
*FastQValidator.cpp - Main method for the Executable.
 
*FastQValidator.cpp - Main method for the Executable.
*[[C++ Library: libcsg|libcsg.a]]
  −
**ParameterList - Class for reading in Parameters.
       

Navigation menu