Changes

From Genome Analysis Wiki
Jump to navigationJump to search
349 bytes removed ,  02:04, 2 November 2010
no edit summary
Line 1: Line 1:  
[[Category:Software|BamValidator]]
 
[[Category:Software|BamValidator]]
 +
[[Category:C++]]
 +
[[Category:libStatGen]]
 +
 
== Status  ==
 
== Status  ==
   Line 5: Line 8:     
== Download ==
 
== Download ==
Click the link to download the tar of the source code: [[Media:bam.0.0.2.tgz|bam.0.0.2.tgz]]
+
http://genome.sph.umich.edu/wiki/Software#Download
 
+
The BAM Validator is found in stagen/src/bam and is called bam (statgen/src/bin/bam).  
If you use this software, please e-mail me, Mary Kate Trost, at mktrost@umich.edu  
  −
 
  −
This version is recommended for Unix users with access to the GNU C++ compiler.
  −
 
  −
To install the BAM Library and the BAM Validator, unpack the downloaded file (tar xvf) and type make. The BAM Validator is found in pipeline/bam and is called bam (pipeline/bam/bam).  
      
== Purpose ==
 
== Purpose ==
Line 185: Line 183:  
Returning: 7 (INVALID)
 
Returning: 7 (INVALID)
 
</pre>
 
</pre>
  −
  −
== Libraries ==
  −
*[[C++ Library: libbam|libbam.a]]
  −
*[[C++ Library: libcsg|libcsg.a]]
 

Navigation menu