Changes

#load the second half of inputfiles

#load the second half of inputfiles

MARKER rsid ALLELE EFFECT_ALLELE OTHER_ALLELE EFFECT BETA WEIGHT total_N PVALUE Add_p SEPARATOR COMMAS PROCESS inputfile5.txt PROCESS inputfile6.txt ALLELE ALLELE OTHER_ALLELE MARKER SNP EFFECT BETA WEIGHT N PVALUE PVALUE SEPARATOR WHITESPACE PROCESS inputfile7.txt ALLELE BETA_ALLELE OTHER_ALLELE PVALUE P_VAL MARKER SNP EFFECT BETA WEIGHT N PROCESS inputfile8.txt  

MARKER rsid

ALLELE EFFECT_ALLELE OTHER_ALLELE

EFFECT BETA

WEIGHT total_N

PVALUE Add_p

SEPARATOR COMMAS

PROCESS inputfile5.txt

PROCESS inputfile6.txt

ALLELE ALLELE OTHER_ALLELE

MARKER SNP

EFFECT BETA

WEIGHT N

PVALUE PVALUE

SEPARATOR WHITESPACE

PROCESS inputfile7.txt

ALLELE BETA_ALLELE OTHER_ALLELE

PVALUE P_VAL

MARKER SNP

EFFECT BETA

WEIGHT N

PROCESS inputfile8.txt  

#for the final meta-analysis of all 8 samples  

#for the final meta-analysis of all 8 samples only output results if the combined weight is greater than 10000 people

#only output results if the combined weight  

#is greater than 10000 people

OUTFILE METAANALYSIS_inputfile1-8_ .tbl MINWEIGHT 10000 ANALYZE  

OUTFILE METAANALYSIS_inputfile1-8_ .tbl

MINWEIGHT 10000

ANALYZE  

QUIT

QUIT

EOT

EOT

</pre>

</pre>