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'''Minimac''' requires a file listing markers in the haplotype file. This file can be easily generated by extracting the second column from the .dat file. In a standard Unix system, a command like this should do:
'''Minimac''' requires a file listing markers in the haplotype file. This file can be easily generated by extracting the second column from the .dat file. In a standard Unix system, a command like this should do:
cut -f 1 sample.dat > target.snps
cut -f 2 -d " " sample.dat > target.snps
=== Running Minimac ===
=== Running Minimac ===
