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LibStatGen: FASTQ

440 bytes added, 14:18, 4 February 2010
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=== Raw Sequence Line ===
*{| class="wikitable" border="1"|-! Validation Criteria! Error Message|-| A base sequence should have non-zero length.*Validates | ERROR on Line <current line #>: |-| All characters in the base sequences against sequence must be in the characters allowed allowable set specified via configuration.** Base Only: A C T G N a c t g n** Color Space Only: 0 1 2 3 .(period)** Base or Color Space: A C T G N a c t g n 0 1 2 3 .(period)*| ERROR on Line <current line #>: |-| Reads should be of a minimum length; many mappers will get into trouble with very short reads.| ERROR on Line <current line #>: |}
=== Plus Line ===
=== Quality String Line ===
*=== Raw Sequence Line ==={| class="wikitable" border="1"|-! Validation Criteria! Error Message|-| A quality string should be present for every base sequence.*| ERROR on Line <current line #>: |-| Paired quality and base sequences should be of the same length.*| ERROR on Line <current line #>: |-| Valid quality values should all have ASCII codes &gt; 32.| ERROR on Line <current line #>: |}
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