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955 bytes added
, 14:58, 23 August 2011
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| ***Cigar – interpretation and mapping between query and reference | | ***Cigar – interpretation and mapping between query and reference |
| ***Pileup – structured access to data by individual reference position | | ***Pileup – structured access to data by individual reference position |
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| + | Currently the repository is recommended for Unix/Linux users with access to the GNU C++ compiler. |
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| + | = Using libStatGen = |
| + | '''If you use this software, please e-mail me, Mary Kate Trost, at mktrost@umich.edu''' |
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| + | Here are links to the copyrights for our code and some of the utilities it uses: |
| + | *[https://github.com/statgen/libStatGen/blob/master/general/COPYING Our Copyright GNU GENERAL PUBLIC LICENSE] and [https://github.com/statgen/libStatGen/blob/master/general/LICENSE.txt Our Copyright Note] |
| + | *[https://github.com/statgen/libStatGen/blob/master/general/LICENSE.twister Copyright for MERSENNE TWISTER (used in Random.cpp)] |
| + | *[https://github.com/statgen/libStatGen/blob/master/samtools/COPYING Samtools Copyright (MIT License)] |
| + | Copies of these can be found in our library under libStatGen/copyrights/. |
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| = Where to Find It = | | = Where to Find It = |
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| If you decide to use git, but need a refresher, see [[How To Use Git]] or [https://statgen.sph.umich.edu/wiki/How_To_Use_Git Notes on how to use git] (if you have access) | | If you decide to use git, but need a refresher, see [[How To Use Git]] or [https://statgen.sph.umich.edu/wiki/How_To_Use_Git Notes on how to use git] (if you have access) |
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| + | libStatGen can also be found within certain releases of statgen tools. The tools will have a release version that also includes a copy of libStatGen. |
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| = What has changed = | | = What has changed = |