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BamUtil (view source)

Revision as of 09:00, 31 August 2011

87 bytes added ,  09:00, 31 August 2011
→‎stats
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                Positions are 0 based and the end_pos is not included in the region.
 
                Positions are 0 based and the end_pos is not included in the region.
 
                Uses bamIndex.
 
                Uses bamIndex.
 +
--minMapQual  : The minimum mapping quality for filtering reads in the baseQC stats.
 
--noeof      : Do not expect an EOF block on a bam file.
 
--noeof      : Do not expect an EOF block on a bam file.
 
--params      : Print the parameter settings
 
--params      : Print the parameter settings
Retrieved from "http://genome.sph.umich.edu/wiki/Special:MobileDiff/3589"

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