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Revision as of 23:47, 21 September 2011
, 23:47, 21 September 2011→Output Parameters
; --prefix [label]
; --prefix [label]
: Use requested prefix for all output files.
: Use requested prefix for all output files.
; --phased
: Output dosages and most likely alleles for each haplotype separately.
; --probs
: Output probabilities for each genotype. Each row in the output will include two columns per marker. The first of these columns denotes the probability of an homozygote for allele 1. The second column denotes the probability of an heterozygote.
; --gzip
; --gzip
: Compress output files on the fly, reducing disk space requirements.
: Compress output files on the fly, reducing disk space requirements.
