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|+ '''Illumina Assay Design Summary'''
|+ '''Illumina Assay Design Summary'''
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! scope="col" | SNP Set
! bgcolor="lightblue" scope="col" | SNP Set
! scope="col" align = "center" | Number of <br>Candidates
! bgcolor="lightblue" scope="col" align = "center" | Number of <br> Candidates
! scope="col" align = "center" | Number of <br>Successful Designs
! bgcolor="lightblue" scope="col" align = "center" | Number of <br> Successful Designs
! scope="col" align = "center" | Additional Notes
! bgcolor="lightblue" scope="col" align = "center" | Additional Notes
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! scope="row" | Coding Content
! bgcolor="lightgray" scope="row" | Coding Content
| align="right" | 275,165
| align="right" | 275,165
| align="right" | 243,094
| align="right" | 243,094
| An additional set of 8,242 SNPs that were unique to the 1000 Genomes Project and populations under-represented in the design was added.
| An additional set of 8,242 SNPs that were unique to the 1000 Genomes Project and populations under-represented in the design was added.
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! scope="row" | GWAS Tag SNPs
! bgcolor="lightgray" scope="row" | GWAS Tag SNPs
| align="right" | 5,763
| align="right" | 5,763
| align="right" | 5,325
| align="right" | 5,325
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! scope="row" | Grid of Common Variants
! bgcolor="lightgray" scope="row" | Grid of Common Variants
| align="right" | 5,710
| align="right" | 5,710
| align="right" | 5,286
| align="right" | 5,286
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! scope="row" | Randonly Selected Synonymous SNPs
! bgcolor="lightgray" scope="row" | Randonly Selected Synonymous SNPs
| align="right" | 5,000
| align="right" | 5,000
| align="right" | 4,651
| align="right" | 4,651
| For 1,000 SNPs, assays were generated on both strands - to faciliate QC efforts and future development of methods for genotyping of rare variants.
| For 1,000 SNPs, assays were generated on both strands - to faciliate QC efforts and future development of methods for genotyping of rare variants.
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! scope="row" | AIM - African Ancestry
! bgcolor="lightgray" scope="row" | AIM - African Ancestry
| align="right" | 3,388
| align="right" | 3,388
| align="right" | 3,241
| align="right" | 3,241
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! scope="row" | AIM - Native American Ancestry
! bgcolor="lightgray" scope="row" | AIM - Native American Ancestry
| align="right" | 1,000
| align="right" | 1,000
| align="right" | 998
| align="right" | 998
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! scope="row" | HLA Tags
! bgcolor="lightgray" scope="row" | HLA Tags
| align="right" | 2,536
| align="right" | 2,536
| align="right" | 2,459
| align="right" | 2,459
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! scope="row" | ESP Requests
! bgcolor="lightgray" scope="row" | ESP Requests
| align="right" | 1,003
| align="right" | 1,003
| align="right" | 843
| align="right" | 843
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! scope="row" | Fingerprint SNPs
! bgcolor="lightgray" scope="row" | Fingerprint SNPs
| align="right" | 285
| align="right" | 285
| align="right" | 259
| align="right" | 259
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! scope="row" | MicroRNA Target Sites
! bgcolor="lightgray" scope="row" | MicroRNA Target Sites
| align="right" | 285
| align="right" | 285
| align="right" | 270
| align="right" | 270
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! scope="row" | Mitochondrial Variants
! bgcolor="lightgray" scope="row" | Mitochondrial Variants
| align="right" | 246
| align="right" | 246
| align="right" | 246
| align="right" | 246
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! scope="row" | Chromosome Y
! bgcolor="lightgray" scope="row" | Chromosome Y
| align="right" | 188
| align="right" | 188
| align="right" | 128
| align="right" | 128
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! scope="row" | Indels
! bgcolor="lightgray" scope="row" | Indels
| align="right" | 181
| align="right" | 181
| align="right" | 181
| align="right" | 181
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